• Istituto di Biologia e Patologia Molecolari

Publications 2009

Fowler MR; Colotti G; Chiancone E; Higuchi Y; Seidler T; Smith GL. 
Complex modulation of L-type Ca(2+) current inactivation by sorcin in isolated rabbit cardiomyocytes. 
Pflügers Archiv;457: 1049-1060
Francesca Di Rosa.  
T lymphocyte interaction with stromal, bone and hematopoietic cells in the bone marrow. 
Immunology and cell biology (Online);87: 20-29
Baiocco P; Colotti G; Franceschini S; Ilari A. 
Molecular Basis of Antimony Treatment in Leishmaniasis. 
Journal of medicinal chemistry;52: 2603-2612
Baiocco P; Franceschini S; Ilari A; Colotti G. 
Trypanothione reductase from Leishmania infantum: cloning, expression, purification, crystallization and preliminary X-ray data analysis. 
Protein and peptide letters (Print);16: 196-200
Di Domenico F; Perluigi M; Foppoli C; Blarzino C; Coccia R; De Marco F; Butterfield DA; Cini C.  
Protective effect of ferulic acid ethyl ester against oxidative stress mediated by UVB irradiation in human epidermal melanocytes. 
Free radical research;43: 365-375
Scaloni F, Gianni S, Federici L, Falini B, Brunori M. 
Folding mechanism of the C-terminal domain of nucleophosmin: residual structure in the denatured state and its pathophysiological significance. 
Travaglini-Allocatelli C, Ivarsson Y, Jemth P, Gianni S. 
Folding and stability of globular proteins and implications for function. 
Current opinion in structural biology;19: 3-7
Ciarapica R, Annibali D, Raimondi L, Savino M, Nasi S, Rota R. 
Targeting Id protein interactions by an engineered HLH domain induces human neuroblastoma cell differentiation. 
Oncogene (Basingstoke);28: 1881-1891
Caruso P, Burla R, Piersanti S, Cherubini G, Remoli C, Martina Y, Saggio I. 
Prion expression is activated by Adenovirus 5 infection and affects the adenoviral cycle in human cells. 
Virology (N.Y.N.Y., Print);385: 343-350
Raffa GD; Siriaco G; Cugusi S; Ciapponi L; Cenci G; Wojcik E; Gatti M. 
The Drosophila modigliani (moi) gene encodes a HOAP-interacting protein required for telomere protection. 
Proceedings of the National Academy of Sciences of the United States of America;106: 2271-2276
Rensen WM, Roscioli E, Tedeschi A, Mangiacasale R, Ciciarello M, Di Gioia SA, Lavia P. 
RanBP1 downregulation sensitizes cancer cells to taxol in a caspase-3-dependent manner. 
Oncogene (Basingstoke);28: 1748-1758
Maria Vincenza Chiantore; Serena Vannucchi; Giorgio Mangino; Zulema Antonia Percario; Elisabetta Affabris; Gianna Fiorucci; Giovanna Romeo. 
Senescence and cell death pathways and their role in cancer therapeutic outcome. 
Current medicinal chemistry;16: 287-300
Petrangeli E, Lenti L, Buchett B, Chinzari P, Sale P, Salvatori L, Ravenna L, Lococo E, Morgante E, Russo A, Frati L, Di Silverio F, Russo MA. 
Lipido-Sterolic Extract of Serenoa repens (LSESr, Permixon®) treatment affects human prostate cancer cell membrane organization. 
Journal of cellular physiology (Print);219: 69-76
Rosanò L, Cianfrocca R, Masi S, Spinella F, Di Castro V, Biroccio A, Salvati E, Nicotra MR, Natali PG, Bagnato A. 
Beta-arrestin links endothelin A receptor to beta-catenin signaling to induce ovarian cancer cell invasion and metastasis. 
Proceedings of the National Academy of Sciences of the United States of America;106: 2806-2811
Spinella F, Garrafa E, Di Castro V, Rosanò L, Nicotra MR, Caruso A, Natali PG, Bagnato A. 
Endothelin-1 stimulates lymphatic endothelial cells and lymphatic vessels to grow and invade. 
Cancer research (Chic. Ill.);69: 2669-2676
Ivarsson, Y., Travaglini-Allocatelli, C., Brunori, M., Gianni, S. 
Engineered symmetric connectivity highlights malleability in protein folding pathways. 
Journal of the American Chemical Society (Print);131: 11727-11733
Chimenti F, Bizzarri B, Maccioni E, Secci D, Bolasco A, Chimenti P, Fioravanti R, Granese A, Carradori S, Tosi F, Ballario P, Vernarecci S, Filetici P. 
A novel histone acetyltransferase inhibitor modulating Gcn5 network: cyclopentylidene-[4-(4' chlorophenyl)thiazol-2-yl)hydrazone. 
Journal of medicinal chemistry;52: 530-536
Di Rosa F. 
T lymphocyte interaction with stromal, bone and hematopoietic cells in the bone marrow. 
Immunology and cell biology (Print);87
Torosantucci L.1; De Santis Puzzonia M1; Cenciarelli C2;Rens W3; Degrassi F. 
Aneuploidy in mitosis is generated by random loss and nondisjunction of individual Ptk1 chromosomes. 
Journal of cell science;122: 3455-3461
Scacchi R; Gambina G; Moretto G; Corbo RM. 
Variability of AChE, BChE, and ChAT Genes in the Late-Onset Form of Alzheimer's Disease and Relationships With Response to Treatment With Donepezil and Rivastigmine. 
American journal of medical genetics. Part B, Neuropsychiatric genetics;150: 502-507
Ilari A, Fiorillo A, Angelaccio S, Florio R, Chiaraluce R, van der Oost J, Consalvi V.  
Crystal structure of a family 16 endoglucanase from the hyperthermophile Pyrococcus furiosus--structural basis of substrate recognition. 
The FEBS journal (Print);276
Scacchi R; Gambina G; Moretto G; Corbo RM. 
Association study between P53 and P73 gene polymorphisms and the sporadic late-onset form of Alzheimer's disease. 
Journal of neural transmission;116: 1179-1184
Corbo RM; Gambina G; Ulizzi L; Moretto G; Scacchi R. 
Genetic variation of CYP19 (aromatase) gene influences age at onset of Alzheimer's disease in women. 
Dementia and geriatric cognitive disorders;150B: 502-507
Vivoli M; Angelucci F; Ilari A; Morea V; Angelaccio ; di Salvo ML; Contestabile R. 
Role of a Conserved Active Site Cation-pi Interaction in Escherichia coli Serine Hydroxymethyltransferase. 
Biochemistry (Easton);48: 12034-12046
Dalmonte ME; Forte E; Genova ML; Giuffrè A; Sarti P; Lenaz G.  
Control of respiration by cytochrome c oxidase in intact cells: role of the membrane potential. 
The Journal of biological chemistry (Print);284: 32331-32335
Moschetti T;  Giuffrè A; Ardiccioni C; Vallone B; Modjtahedi N; Kroemer G; Brunori M. 
Failure of Apoptosis-inducing Factor to Act as Neuroglobin Reductase. 
Biochemical and biophysical research communications (Print);390: 121-124
Borisov VB; Forte E; Giuffrè A; Konstantinov A; Sarti P. 
Reaction of nitric oxide with the oxidized di-heme and heme-copper oxygen-reducing centers of terminal oxidases: different reaction pathways and end-products”. 
Journal of inorganic biochemistry;103: 1185-1187
Vicente JB; Testa F; Mastronicola D;, Forte E;, Sarti P; Teixeira M; Giuffrè A. 
Redox properties of the oxygen-detoxifying flavodiiron protein from the human parasite Giardia intestinalis. 
Archives of biochemistry and biophysics (Print);488: 9-13
Perluigi M; Giorgi A; Blarzino C; De Marco F; Foppoli C; Di Domenico F; Butterfield DA; Schininà ME; Cini C; Coccia R.  
Proteomics analysis of protein expression and specific protein oxidation in human papillomavirus transformed keratinocytes upon UVB irradiation. 
Journal of Cellular and Molecular Medicine (Print);13: 1809-1822
Di Domenico F; Foppoli C; Blarzino C; Perluigi M; Paolini F; Morici S; Coccia R; Cini C; De Marco F.  
Expression of human papilloma virus type 16 E5 protein in amelanotic melanoma cells regulates endo-cellular pH and restores tyrosinase activity. 
Journal of experimental & clinical cancer research (Online);28
Bellapadrona G, Stefanini S, Zamparelli C, Theil EC, Chiancone E. 
Iron translocation into and out of Listeria innocua Dps and size distribution of the protein-enclosed nanomineral are modulated by the electrostatic gradient at the 3-fold. 
Gianni S, Brunori M, Jemth P, Oliveberg M, Zhang M. 
Distinguishing between Smooth and Rough Free Energy Barriers in Protein Folding. 
Biochemistry (Easton)
Savino C; Montemiglio LC; Sciara G; Miele AE; Kendrew SG; Jemth P; Gianni S; Vallone B. 
Investigating the structural plasticity of a cytochrome P450: three-dimensional structures of P450 EryK and binding to its physiological substrate. 
The Journal of biological chemistry (Print);284: 29170-29179
Chi CN, Bach A, Engström A, Wang H, Strømgaard K, Gianni S, Jemth P. 
A sequential binding mechanism in a PDZ domain. 
Biochemistry (Easton);48: 7089-7097
Federici L, Masulli M, Gianni S, Di Ilio C, Allocati N. 
A conserved hydrogen-bond network stabilizes the structure of Beta class glutathione S-transferases. 
Biochemical and biophysical research communications (Print);382: 525-529
Sicorello A, Torrassa S, Soldi G, Gianni S, Travaglini-Allocatelli C, Taddei N, Relini A, Chiti F. 
Agitation and high ionic strength induce amyloidogenesis of a folded PDZ domain in native conditions. 
Biophysical journal (Print);96: 2289-2298
Simmaco M; Kreil G; Barra D. 
Bombinins, antimicrobial peptides from Bombina species. 
Biochimica et biophysica acta. Biomembranes;1788: 1551-1555
Costanzo G, Pino S, Ciciriello F, Di Mauro E. 
Generation of long RNA chains in water. 
Journal of cellular biochemistry (Print)
Colonna S.(a) , Perdicchia D. (a)  , Di Mauro E. (b).  
Enantioselective reactions catalyzed by synthetic enzymes. A model for chemical evolution. 
Tetrahedron: asymmetry (Print);20: 1709-1714
Saladino R., Crestini C., Ciciriello F., Pino S., Costanzo G., Di Mauro E. 
From formamide to RNA: the roles of formamide and water in the evolution of chemical information. 
Research in microbiology (Paris);160: 441-448
Travers A, Caserta M, Churcher M, Hiriart E, and Di Mauro E. 
Nucleosome positioning – what do we really know?. 
Molecular bioSystems (Print)
Caserta M, Agricola E, Churcher M, Hiriart E, Verdone L, Di Mauro E, Travers A. 
A translational signature for nucleosome positioning in vivo. 
Nucleic acids research;37: 5309-5321
Ferretti E; De Smaele E; Po A; Di Marcotullio L; Tosi E; Espinola MSB; Di Rocco C; Riccardi R; Giangaspero F; Farcomeni A; Nofroni I;  Laneve P; Gioia U; Caffarelli E; Bozzoni I; Screpanti I; Gulino A. 
MicroRNA profiling in human medulloblastoma. 
International journal of cancer (Print);124: 568-577
De Marchis M.L., Ballarino M., Salvatori B., Puzzolo M.C., Bozzoni I. and Fatica A. 
A new molecular network comprising PU.1, interferon regulatory factor proteins and miR-342 stimulates ATRA-mediated granulocytic differentiation of Acute Promyelocitic Leukemia cells. 
Leukemia;23: 856-862
Starnes L., Sorrentino A., Pelosi E., Ballarino M., Morsilli O., Biffoni M., Santoro S., Felli N., Castelli G., De Marchis M.L., Mastroberardino G., Gabbianelli M., Fatica A., Bozzoni I., Nervi C. and Peschle C. 
NFI-A directs the fate of hematopoietic progenitors to the erythroid or granulocytic lineage and controls -globin and G-CSF receptor expression. 
Blood;114: 1753-1763
Ballarino M., Pagano F., Girardi E., Morlando M., Cacchiarelli D., Marchioni M., Proudfoot N. and Bozzoni I. 
Coupled RNA processing and transcription of intergenic primary miRNAs. 
Molecular and cellular biology (Print);29: 5632-5638
Ravenna L, Sale P, Di Vito M, Russo A, Salvatori L, Tafani M, Mari E, Sentinelli S, Petrangeli E, Gallucci M, Di Silverio F, Russo MA. 
Up-regulation of the inflammatory-reparative phenotype in human prostate carcinoma. 
The Prostate (Print);69: 1245-1255
Zampieri M; Passananti C; Calabrese R; Perilli M; Corbi N; De Cave F; Guastafierro T; Bacalini MG; Reale A; Amicosante G; Calabrese L; Zlatanova J; Caiafa P. 
Parp1 localizes within the Dnmt1 promoter and protects its unmethylated state by its enzymatic activity. 
PloS one;4: e4717-1-e4717-10
Wainman A., Creque J., Williams B., Williams EV., Bonaccorsi S., Gatti M., and Goldberg ML. 
Roles of the Drosophila NudE protein in kinetochore function and centrosome migration. 
Journal of cell science;122: 1747-1758
E. Bucciarelli; C. Pellacani; V. Naim; A. Palena; M. Gatti;M.P. Somma.  
Drosophila Dgt6 protein interacts with Ndc80, Msps/XMAP215 and g-tubulin to promote kinetochore-driven MT formation. 
Current biology
De Luca C; Zhou Y; Montanari A; Morea V; Oliva R; Besagni C; Bolotin-Fukuhara M; Frontali L; Francisci S. 
Can yeast be used to study mitochondrial diseases? Biolistic tRNA mutants for the analysis of mechanisms and suppressors. 
Mitochondrion (Amsterdam. Print);9: 408-417
Savino C; Miele, A.E.; Draghi F.; Johnson K.A.; Sciara G.; Brunori M.; Vallone B. 
Pattern of cavities in globins: The case of human hemoglobin. 
Biopolymers (Print);91: 1097-1107
Di Certo MG, Corbi N, Strimpakos G, Onori A, Luvisetto S, Severini C, Guglielmotti A, Batassa EM, Pisani C, Floridi A, Benassi B, Fanciulli M, Magrelli A, Mattei E, Passananti C. 
The artificial gene Jazz, a transcriptional regulator of utrophin, corrects the dystrophic pathology in mdx mice. 
Human molecular genetics (Print)
Pedotti M; Rosini E; Molla G; Moschetti T; Savino C; Vallone B; Pollegioni L. 
Glyphosate resistance by engineering the flavoenzyme glycine oxidase. 
The Journal of biological chemistry (Print);284: 36415-36423
Cesarini E, Mariotti FR, Cioci F, Camilloni G. 
RNA Polymerase I transcription  silences ncRNAs at the rDNA in S. cerevisiae. 
Giansanti F., Di Leandro L., Koutris I., Pitari G., Fabbrini M.S., Lombardi A., Flavell D.J., Flavell S., Gianni S., Ippoliti R. 
Engineering a switchable toxin: the potential use of PDZ domains in the expression, targeting and activation of modified saporin variants. 
Protein engineering (Print)
Robinett C.C.; Giansanti M.G.;Gatti M.; Fuller M.T. 
TRAPPII function is required for cleavage furrow ingression and localization of Rab11 in dividing male meiotic cells. 
Journal of cell science;122: 4526-4534
Fatica A., Bozzoni I. 
Role of microRNAs in hematological malignancies. 
Ciciriello F., Costanzo G., Pino S., Di Mauro E. 
Spontaneous generation revisited at the molecular level. 
Salvatori L, Caporuscio F, Coroniti G, Starace G, Frati L, Russo MA, Petrangeli E. 
Down-regulation of epidermal growth factor receptor induced by estrogens and phytoestrogens promotes the differentiation of U2OS human osteosarcoma cells. 
Journal of cellular physiology (Print);220: 35-44
Desantis A; Onori A; Di Certo MG; Mattei E; Fanciulli M; Passananti C; Corbi N. 
Novel activation domain derived from Che-1 cofactor coupled with the artificial protein Jazz drives utrophin upregulation. 
Neuromuscular disorders: 158-162
Marsango S, di Patti MC, Barra D, Miele R. 
The Bv8 gene from Bombina orientalis: Molecular cloning, genomic organization and functional characterization of the promoter. 
Peptides (New York, NY : 1980);15: 607-614
I Ruberti (1); G Sessa (1); M Sassi (1); A Ciolfi (1); S Salvucci (1); M Possenti (2); M Carabelli (1); G Morelli (2).  
Regulatory networks for the shade avoidance response. 
Comparative biochemistry and physiology. Part A, Molecular & integrative physiology;153A: S206-S206
Owen, JB (Owen, Joshua B.)1,2; Di Domenico, F (Di Domenico, Fabio)3; Sultana, R (Sultana, Rukhsana)1,2; Perluigi, M (Perluigi, Marzia)3; Cini, C (Cini, Chiara)3; Pierce, WM (Pierce, William M.)4; Butterfield, DA (Butterfield, D. Allan)1,2.  
Proteomics-Determined Differences in the Concanavalin-A-Fractionated Proteome of Hippocampus and Inferior Parietal Lobule in Subjects with Alzheimer's Disease and Mild Cognitive Impairment: Implications for Progression of AD. 
Journal of proteome research (Print);8: 471-482
S Baima*; V Forte*; M Possenti*; B Felici**; I Ruberti***; G Morelli*.  
HD-ZIP III transcription factors and ACL5 are involved in a regulatory loop controlling vascular development. 
Patrizia Filetici, Maria Laura Santarelli,.